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dc.contributor.authorSariyer, Emrah
dc.contributor.authorYakarsonmez, Sinem
dc.contributor.authorDanis, Ozkan
dc.contributor.authorTurgut-Balik, Dilek
dc.date.accessioned2021-11-09T19:48:59Z
dc.date.available2021-11-09T19:48:59Z
dc.date.issued2018
dc.identifier.issn0141-8130
dc.identifier.issn1879-0003
dc.identifier.urihttps://doi.org/10.1016/j.ijbiomac.2018.08.184
dc.identifier.urihttps://hdl.handle.net/20.500.12440/3889
dc.description.abstractTropical theileriosis caused by Theileria annulata obligate parasite that infect ruminant animals, including Bos taurus. The disease results massive economic losses in livestock production worldwide. Here we describe cloning, expression and both biochemical and structural characterization of beta enolase from Bos taurus in vitro and in silico. The interconversion of 2-phosphoglycerate to phosphoenolpyruvate was catalyzed by enolase is a metalloenzyme in glycolytic pathway and gluconeogenesis. Enolase from Bos taurus was cloned, expressed and the protein was purified at 95% purity using cobalt column by affinity chromatography. The optimum enzymatic activity was calculated at pH 6.5. For the first time in the literature, the kinetic parameters of the enzyme, Vmax and Km, were measured as 0.1141 mM/min and 0.514 mM, respectively. Besides, Bos taurus enolase 3-dimensional structure was built by homology modelling to be used in silico analyses. The interactions of the enzyme-substrate complex were elucidated by molecular dynamics simulations for 100 ns. These interactions were found to be the same as experimentally determined interactions in yeast. These results would enable further structure based drug design studies with the biochemical characterization of the host organism Bos taurus enolase enzyme in vitro and the elucidation of behavior of enzyme-substrate complex in silico. (C) 2018 Elsevier B.V. All rights reserved.en_US
dc.description.sponsorshipYildiz Technical University Scientific Research Projects Coordination DepartmentYildiz Technical University [2015-07-04-KAP07]en_US
dc.description.sponsorshipThis research has been supported by Yildiz Technical University Scientific Research Projects Coordination Department. Project Number: 2015-07-04-KAP07. The numerical calculations reported in this paper were fully/partially performed at TUBITAK ULAKBIM, High Performance and Grid Computing Center (TRUBA resources).en_US
dc.language.isoengen_US
dc.publisherElsevier Science Bven_US
dc.relation.ispartofInternational Journal of Biological Macromoleculesen_US
dc.rightsinfo:eu-repo/semantics/closedAccessen_US
dc.subjectEnolaseen_US
dc.subjectPurificationen_US
dc.subjectBiochemical characterizationen_US
dc.subjectHomology modellingen_US
dc.subjectMolecular dockingen_US
dc.subjectMolecular dynamics simulationsen_US
dc.titleA study of Bos taurus muscle specific enolase; biochemical characterization, homology modelling and investigation of molecular interaction using molecular docking and dynamics simulationsen_US
dc.typearticleen_US
dc.relation.publicationcategoryMakale - Uluslararası Hakemli Dergi - Kurum Öğretim Elemanıen_US
dc.description.wospublicationidWOS:000449892800108en_US
dc.description.scopuspublicationid2-s2.0-85053050155en_US
dc.departmentGümüşhane Üniversitesien_US
dc.authoridSARIYER, Emrah / 0000-0003-1721-0314
dc.authoridKocer, Sinem / 0000-0003-0517-7422
dc.authoridDanis, Ozkan / 0000-0003-1781-0520
dc.identifier.volume120en_US
dc.identifier.startpage2346en_US
dc.identifier.doi10.1016/j.ijbiomac.2018.08.184
dc.identifier.endpage2353en_US
dc.authorwosidTurgut-Balik, Dilek / AAZ-5212-2020
dc.authorwosidSARIYER, Emrah / AAE-2851-2019
dc.authorwosidKocer, Sinem / N-8859-2019
dc.authorscopusid57016727200
dc.authorscopusid57016772000
dc.authorscopusid26638740000
dc.authorscopusid6507777544
dc.description.pubmedpublicationidPubMed: 30172809en_US


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